Pyleoclim
1.1.0b0
Working with Pyleoclim
Installing Pyleoclim
Pyleoclim User API
Tutorials
Advanced functionalities
Pyleoclim Utilities API (pyleoclim.utils)
Getting Involved
Citing Pyleoclim
Contributing to Pyleoclim
Pyleoclim
Index
Index
A
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B
|
C
|
D
|
E
|
F
|
G
|
H
|
I
|
J
|
K
|
L
|
M
|
N
|
O
|
P
|
Q
|
R
|
S
|
T
|
U
|
V
|
W
|
X
A
alias_filter() (pyleoclim.utils.wavelet.AliasFilter method)
AliasFilter (class in pyleoclim.utils.wavelet)
angle_sig() (in module pyleoclim.utils.wavelet)
angle_stats() (in module pyleoclim.utils.wavelet)
annualize() (in module pyleoclim.utils.tsutils)
anti_alias() (pyleoclim.core.psds.MultiplePSD method)
(pyleoclim.core.psds.PSD method)
append() (pyleoclim.core.multipleseries.MultipleSeries method)
ar1_fit() (in module pyleoclim.utils.tsmodel)
ar1_fit_evenly() (in module pyleoclim.utils.tsmodel)
ar1_model() (in module pyleoclim.utils.tsmodel)
ar1_sim() (in module pyleoclim.utils.tsmodel)
assertPositiveInt() (in module pyleoclim.utils.wavelet)
association() (in module pyleoclim.utils.correlation)
B
beta2Hurst() (in module pyleoclim.utils.spectral)
beta_est() (pyleoclim.core.psds.MultiplePSD method)
(pyleoclim.core.psds.PSD method)
beta_estimation() (in module pyleoclim.utils.spectral)
bin() (pyleoclim.core.multipleseries.MultipleSeries method)
(pyleoclim.core.series.Series method)
boundary_conditions() (in module pyleoclim.utils.emd_utils)
butterworth() (in module pyleoclim.utils.filter)
C
calculate_distances() (in module pyleoclim.utils.tsutils)
calculate_overlapping_sets() (in module pyleoclim.utils.plotting)
CaseInsensitiveDict (class in pyleoclim.utils.lipdutils)
causality() (pyleoclim.core.series.Series method)
center() (in module pyleoclim.utils.tsutils)
(pyleoclim.core.series.Series method)
checkTimeAxis() (in module pyleoclim.utils.lipdutils)
checkXaxis() (in module pyleoclim.utils.lipdutils)
chisquare_inv() (in module pyleoclim.utils.wavelet)
chisquare_solve() (in module pyleoclim.utils.wavelet)
clean() (pyleoclim.core.series.Series method)
clean_ts() (in module pyleoclim.utils.tsbase)
closefig() (in module pyleoclim.utils.plotting)
coh (pyleoclim.core.globalcoherence.GlobalCoherence attribute)
Coherence (class in pyleoclim.core.coherence)
coi (pyleoclim.core.globalcoherence.GlobalCoherence attribute)
colored_noise() (in module pyleoclim.utils.tsmodel)
colored_noise_2regimes() (in module pyleoclim.utils.tsmodel)
common_time() (pyleoclim.core.multipleseries.MultipleSeries method)
compare() (pyleoclim.core.series.Series method)
compute_dist() (in module pyleoclim.utils.mapping)
convert_datetime_index_to_time() (in module pyleoclim.utils.tsbase)
convert_time_unit() (pyleoclim.core.multipleseries.MultipleSeries method)
(pyleoclim.core.series.Series method)
copy() (pyleoclim.core.coherence.Coherence method)
(pyleoclim.core.corr.Corr method)
(pyleoclim.core.correns.CorrEns method)
(pyleoclim.core.globalcoherence.GlobalCoherence method)
(pyleoclim.core.multipleseries.MultipleSeries method)
(pyleoclim.core.psds.MultiplePSD method)
(pyleoclim.core.psds.PSD method)
(pyleoclim.core.scalograms.MultipleScalogram method)
(pyleoclim.core.scalograms.Scalogram method)
(pyleoclim.core.series.Series method)
(pyleoclim.core.ssares.SsaRes method)
Corr (class in pyleoclim.core.corr)
corr_isopersist() (in module pyleoclim.utils.correlation)
corr_isospec() (in module pyleoclim.utils.correlation)
corr_sig() (in module pyleoclim.utils.correlation)
corr_ttest() (in module pyleoclim.utils.correlation)
correlation() (pyleoclim.core.ensembleseries.EnsembleSeries method)
(pyleoclim.core.multipleseries.MultipleSeries method)
(pyleoclim.core.series.Series method)
CorrEns (class in pyleoclim.core.correns)
cov_shrink_rblw() (in module pyleoclim.utils.correlation)
cwt() (in module pyleoclim.utils.wavelet)
cwt_coherence() (in module pyleoclim.utils.wavelet)
cwt_psd() (in module pyleoclim.utils.spectral)
D
dashboard() (pyleoclim.core.coherence.Coherence method)
(pyleoclim.core.ensemblegeoseries.EnsembleGeoSeries method)
(pyleoclim.core.geoseries.GeoSeries method)
(pyleoclim.core.resolutions.Resolution method)
datetime_index (pyleoclim.core.series.Series property)
decompose() (pyleoclim.utils.tsutils.EmpiricalModeDecomposition method)
describe() (pyleoclim.core.resolutions.MultipleResolution method)
(pyleoclim.core.resolutions.Resolution method)
detect_outliers_DBSCAN() (in module pyleoclim.utils.tsutils)
detect_outliers_kmeans() (in module pyleoclim.utils.tsutils)
detrend() (in module pyleoclim.utils.tsutils)
(pyleoclim.core.multipleseries.MultipleSeries method)
(pyleoclim.core.series.Series method)
disambiguate_time_metadata() (in module pyleoclim.utils.tsbase)
dist_sphere() (in module pyleoclim.utils.mapping)
E
eff_sample_size() (in module pyleoclim.utils.tsutils)
EmpiricalModeDecomposition (class in pyleoclim.utils.tsutils)
EnsembleGeoSeries (class in pyleoclim.core.ensemblegeoseries)
EnsembleSeries (class in pyleoclim.core.ensembleseries)
EnsMultivarDecomp (class in pyleoclim.core.ensmultivardecomp)
enumerateLipds() (in module pyleoclim.utils.lipdutils)
enumerateTs() (in module pyleoclim.utils.lipdutils)
equal_lengths() (pyleoclim.core.multipleseries.MultipleSeries method)
equals() (pyleoclim.core.series.Series method)
extr() (in module pyleoclim.utils.emd_utils)
F
fdr() (in module pyleoclim.utils.correlation)
fdr_basic() (in module pyleoclim.utils.correlation)
fdr_master() (in module pyleoclim.utils.correlation)
fill_na() (pyleoclim.core.series.Series method)
filter() (pyleoclim.core.multipleseries.MultipleSeries method)
(pyleoclim.core.series.Series method)
firwin() (in module pyleoclim.utils.filter)
flip() (pyleoclim.core.multipleseries.MultipleSeries method)
(pyleoclim.core.series.Series method)
freq_vector_log() (in module pyleoclim.utils.wavelet)
freq_vector_lomb_scargle() (in module pyleoclim.utils.wavelet)
freq_vector_nfft() (in module pyleoclim.utils.wavelet)
freq_vector_scale() (in module pyleoclim.utils.wavelet)
freq_vector_welch() (in module pyleoclim.utils.wavelet)
frequency (pyleoclim.core.globalcoherence.GlobalCoherence attribute)
from_AgeEnsembleArray() (pyleoclim.core.ensemblegeoseries.EnsembleGeoSeries class method)
(pyleoclim.core.ensembleseries.EnsembleSeries class method)
from_csv() (pyleoclim.core.series.Series class method)
from_json() (pyleoclim.core.geoseries.GeoSeries class method)
(pyleoclim.core.multipleseries.MultipleSeries class method)
(pyleoclim.core.series.Series class method)
from_PaleoEnsembleArray() (pyleoclim.core.ensemblegeoseries.EnsembleGeoSeries class method)
(pyleoclim.core.ensembleseries.EnsembleSeries class method)
from_pandas() (pyleoclim.core.series.Series class method)
from_param() (pyleoclim.core.surrogateseries.SurrogateSeries method)
from_series() (pyleoclim.core.surrogateseries.SurrogateSeries method)
G
gauss() (in module pyleoclim.utils.tsutils)
gaussianize() (in module pyleoclim.utils.tsutils)
(pyleoclim.core.series.Series method)
gen_ar1_evenly() (in module pyleoclim.utils.tsmodel)
gen_dict_extract() (in module pyleoclim.utils.lipdutils)
gen_ts() (in module pyleoclim.utils.tsmodel)
GeoSeries (class in pyleoclim.core.geoseries)
get_archive_type() (in module pyleoclim.utils.lipdutils)
get_envelops() (in module pyleoclim.utils.emd_utils)
get_label_width() (in module pyleoclim.utils.plotting)
get_wwz_func() (in module pyleoclim.utils.wavelet)
getEnsemble() (in module pyleoclim.utils.lipdutils)
getLipd() (in module pyleoclim.utils.lipdutils)
getMeasurement() (in module pyleoclim.utils.lipdutils)
gkernel() (in module pyleoclim.utils.tsutils)
(pyleoclim.core.multipleseries.MultipleSeries method)
(pyleoclim.core.series.Series method)
global_coh (pyleoclim.core.globalcoherence.GlobalCoherence attribute)
global_coherence() (pyleoclim.core.series.Series method)
GlobalCoherence (class in pyleoclim.core.globalcoherence)
granger_causality() (in module pyleoclim.utils.causality)
H
hightlight_intervals() (in module pyleoclim.utils.plotting)
histplot() (pyleoclim.core.ensembleseries.EnsembleSeries method)
(pyleoclim.core.resolutions.Resolution method)
(pyleoclim.core.series.Series method)
I
increments() (in module pyleoclim.utils.tsutils)
(pyleoclim.core.multipleseries.MultipleSeries method)
infer_period_unit_from_time_unit() (in module pyleoclim.utils.plotting)
inst_freq() (in module pyleoclim.utils.emd_utils)
interp() (in module pyleoclim.utils.tsutils)
(pyleoclim.core.multipleseries.MultipleSeries method)
(pyleoclim.core.series.Series method)
io() (pyleoclim.utils.tsutils.EmpiricalModeDecomposition method)
is_evenly_spaced() (in module pyleoclim.utils.tsbase)
(pyleoclim.core.series.Series method)
isEnsemble() (in module pyleoclim.utils.lipdutils)
isMeasurement() (in module pyleoclim.utils.lipdutils)
isModel() (in module pyleoclim.utils.lipdutils)
isopersistent_rn() (in module pyleoclim.utils.tsmodel)
isPyleoclim() (in module pyleoclim.utils.jsonutils)
iterate_through_dict() (in module pyleoclim.utils.jsonutils)
J
json_to_PyleoObj() (in module pyleoclim.utils.jsonutils)
K
keep_center_colormap() (in module pyleoclim.utils.plotting)
keep_decomposing() (pyleoclim.utils.tsutils.EmpiricalModeDecomposition method)
kirchner_basic() (in module pyleoclim.utils.wavelet)
kirchner_f2py() (in module pyleoclim.utils.wavelet)
kirchner_nproc() (in module pyleoclim.utils.wavelet)
kirchner_numba() (in module pyleoclim.utils.wavelet)
L
label_intervals() (in module pyleoclim.utils.plotting)
lanczos() (in module pyleoclim.utils.filter)
liang() (in module pyleoclim.utils.causality)
liang_causality() (in module pyleoclim.utils.causality)
LipdToOntology() (in module pyleoclim.utils.lipdutils)
lomb_scargle() (in module pyleoclim.utils.spectral)
M
make_annotation_ax() (in module pyleoclim.utils.plotting)
make_coi() (in module pyleoclim.utils.wavelet)
make_even_axis() (in module pyleoclim.utils.tsutils)
make_freq_vector() (in module pyleoclim.utils.wavelet)
make_labels() (pyleoclim.core.ensemblegeoseries.EnsembleGeoSeries method)
(pyleoclim.core.ensembleseries.EnsembleSeries method)
(pyleoclim.core.resolutions.Resolution method)
(pyleoclim.core.series.Series method)
make_omega() (in module pyleoclim.utils.wavelet)
make_phantom_ax() (in module pyleoclim.utils.plotting)
make_scalar_mappable() (in module pyleoclim.utils.plotting)
map() (in module pyleoclim.utils.mapping)
(pyleoclim.core.geoseries.GeoSeries method)
(pyleoclim.core.multiplegeoseries.MultipleGeoSeries method)
map_neighbors() (pyleoclim.core.geoseries.GeoSeries method)
mapAgeEnsembleToPaleoData() (in module pyleoclim.utils.lipdutils)
mcpca() (pyleoclim.core.mulensgeoseries.MulEnsGeoSeries method)
mean_and_amplitude() (pyleoclim.utils.tsutils.EmpiricalModeDecomposition method)
modelNumber() (in module pyleoclim.utils.lipdutils)
modeplot() (pyleoclim.core.ensmultivardecomp.EnsMultivarDecomp method)
(pyleoclim.core.multivardecomp.MultivariateDecomp method)
(pyleoclim.core.ssares.SsaRes method)
module
pyleoclim.utils.causality
pyleoclim.utils.correlation
pyleoclim.utils.decomposition
pyleoclim.utils.emd_utils
pyleoclim.utils.filter
pyleoclim.utils.jsonutils
pyleoclim.utils.lipdutils
pyleoclim.utils.mapping
pyleoclim.utils.plotting
pyleoclim.utils.spectral
pyleoclim.utils.tsbase
pyleoclim.utils.tsmodel
pyleoclim.utils.tsutils
pyleoclim.utils.wavelet
mtm() (in module pyleoclim.utils.spectral)
MulEnsGeoSeries (class in pyleoclim.core.mulensgeoseries)
MultipleGeoSeries (class in pyleoclim.core.multiplegeoseries)
MultiplePSD (class in pyleoclim.core.psds)
MultipleResolution (class in pyleoclim.core.resolutions)
MultipleScalogram (class in pyleoclim.core.scalograms)
MultipleSeries (class in pyleoclim.core.multipleseries)
MultivariateDecomp (class in pyleoclim.core.multivardecomp)
N
n_ll_unevenly_spaced_ar1() (in module pyleoclim.utils.tsmodel)
O
objname_to_obj() (in module pyleoclim.utils.jsonutils)
open_json() (in module pyleoclim.utils.jsonutils)
outliers() (pyleoclim.core.series.Series method)
overlap() (in module pyleoclim.utils.tsbase)
(pyleoclim.core.series.Series method)
P
pandas_method() (pyleoclim.core.series.Series method)
pca() (pyleoclim.core.multiplegeoseries.MultipleGeoSeries method)
(pyleoclim.core.multipleseries.MultipleSeries method)
periodogram() (in module pyleoclim.utils.spectral)
phase_stats() (pyleoclim.core.coherence.Coherence method)
phaseran() (in module pyleoclim.utils.tsutils)
phaseran2() (in module pyleoclim.utils.tsutils)
pick_proj() (in module pyleoclim.utils.mapping)
plot() (pyleoclim.core.coherence.Coherence method)
(pyleoclim.core.correns.CorrEns method)
(pyleoclim.core.globalcoherence.GlobalCoherence method)
(pyleoclim.core.multipleseries.MultipleSeries method)
(pyleoclim.core.psds.MultiplePSD method)
(pyleoclim.core.psds.PSD method)
(pyleoclim.core.resolutions.Resolution method)
(pyleoclim.core.scalograms.Scalogram method)
(pyleoclim.core.series.Series method)
PLOT_DEFAULT (in module pyleoclim.utils.lipdutils)
plot_envelope() (pyleoclim.core.ensembleseries.EnsembleSeries method)
(pyleoclim.core.psds.MultiplePSD method)
plot_scatter_xy() (in module pyleoclim.utils.plotting)
plot_traces() (pyleoclim.core.ensembleseries.EnsembleSeries method)
plot_xy() (in module pyleoclim.utils.plotting)
pre_process_list() (in module pyleoclim.utils.lipdutils)
pre_process_str() (in module pyleoclim.utils.lipdutils)
prepare_wwz() (in module pyleoclim.utils.wavelet)
preprocess() (in module pyleoclim.utils.tsutils)
promptForVariable() (in module pyleoclim.utils.lipdutils)
prop_alt() (in module pyleoclim.utils.correlation)
PSD (class in pyleoclim.core.psds)
psd_ar() (in module pyleoclim.utils.spectral)
psd_fBM() (in module pyleoclim.utils.spectral)
pyleoclim.utils.causality
module
pyleoclim.utils.correlation
module
pyleoclim.utils.decomposition
module
pyleoclim.utils.emd_utils
module
pyleoclim.utils.filter
module
pyleoclim.utils.jsonutils
module
pyleoclim.utils.lipdutils
module
pyleoclim.utils.mapping
module
pyleoclim.utils.plotting
module
pyleoclim.utils.spectral
module
pyleoclim.utils.tsbase
module
pyleoclim.utils.tsmodel
module
pyleoclim.utils.tsutils
module
pyleoclim.utils.wavelet
module
PyleoObj_to_dict() (in module pyleoclim.utils.jsonutils)
PyleoObj_to_json() (in module pyleoclim.utils.jsonutils)
Q
quantiles() (pyleoclim.core.ensembleseries.EnsembleSeries method)
(pyleoclim.core.psds.MultiplePSD method)
(pyleoclim.core.scalograms.MultipleScalogram method)
R
random_time_axis() (in module pyleoclim.utils.tsmodel)
reduce_duplicated_timestamps() (in module pyleoclim.utils.tsbase)
remove() (pyleoclim.core.multipleseries.MultipleSeries method)
remove_outliers() (in module pyleoclim.utils.tsutils)
resample() (pyleoclim.core.geoseries.GeoSeries method)
(pyleoclim.core.series.Series method)
Resolution (class in pyleoclim.core.resolutions)
resolution() (pyleoclim.core.multipleseries.MultipleSeries method)
(pyleoclim.core.series.Series method)
S
savefig() (in module pyleoclim.utils.plotting)
savitzky_golay() (in module pyleoclim.utils.filter)
scale (pyleoclim.core.globalcoherence.GlobalCoherence attribute)
Scalogram (class in pyleoclim.core.scalograms)
scatter_map() (in module pyleoclim.utils.mapping)
scatter_xy() (in module pyleoclim.utils.plotting)
screeplot() (pyleoclim.core.ensmultivardecomp.EnsMultivarDecomp method)
(pyleoclim.core.multivardecomp.MultivariateDecomp method)
(pyleoclim.core.ssares.SsaRes method)
searchVar() (in module pyleoclim.utils.lipdutils)
segment() (pyleoclim.core.geoseries.GeoSeries method)
(pyleoclim.core.series.Series method)
sel() (pyleoclim.core.multipleseries.MultipleSeries method)
(pyleoclim.core.series.Series method)
Series (class in pyleoclim.core.series)
set_proj() (in module pyleoclim.utils.mapping)
set_style() (in module pyleoclim.utils.plotting)
signif_isopersist() (in module pyleoclim.utils.causality)
signif_isospec() (in module pyleoclim.utils.causality)
signif_test() (pyleoclim.core.coherence.Coherence method)
(pyleoclim.core.globalcoherence.GlobalCoherence method)
(pyleoclim.core.psds.PSD method)
(pyleoclim.core.scalograms.Scalogram method)
similar_string() (in module pyleoclim.utils.lipdutils)
simple_stats() (in module pyleoclim.utils.tsutils)
slice() (pyleoclim.core.ensembleseries.EnsembleSeries method)
(pyleoclim.core.series.Series method)
sm_ar1_sim() (in module pyleoclim.utils.tsmodel)
sort() (pyleoclim.core.series.Series method)
sort_ts() (in module pyleoclim.utils.tsbase)
spectral() (pyleoclim.core.multipleseries.MultipleSeries method)
(pyleoclim.core.series.Series method)
ssa() (in module pyleoclim.utils.decomposition)
(pyleoclim.core.series.Series method)
SsaRes (class in pyleoclim.core.ssares)
stackplot() (pyleoclim.core.ensembleseries.EnsembleSeries method)
(pyleoclim.core.mulensgeoseries.MulEnsGeoSeries method)
(pyleoclim.core.multipleseries.MultipleSeries method)
standardize() (in module pyleoclim.utils.tsutils)
(pyleoclim.core.multipleseries.MultipleSeries method)
(pyleoclim.core.series.Series method)
stats() (pyleoclim.core.series.Series method)
std() (in module pyleoclim.utils.tsutils)
stop_EMD() (pyleoclim.utils.tsutils.EmpiricalModeDecomposition method)
stop_sifting() (pyleoclim.utils.tsutils.EmpiricalModeDecomposition method)
storey() (in module pyleoclim.utils.correlation)
stripes() (pyleoclim.core.multipleseries.MultipleSeries method)
(pyleoclim.core.series.Series method)
summary_plot() (pyleoclim.core.resolutions.MultipleResolution method)
(pyleoclim.core.series.Series method)
SurrogateSeries (class in pyleoclim.core.surrogateseries)
T
tau_estimation() (in module pyleoclim.utils.tsmodel)
tc_wave_bases() (in module pyleoclim.utils.wavelet)
tc_wave_signif() (in module pyleoclim.utils.wavelet)
tc_wavelet() (in module pyleoclim.utils.wavelet)
tidy_labels() (in module pyleoclim.utils.plotting)
time_coverage_plot() (pyleoclim.core.multipleseries.MultipleSeries method)
time_geo_plot() (pyleoclim.core.multiplegeoseries.MultipleGeoSeries method)
time_to_datetime() (in module pyleoclim.utils.tsbase)
time_unit_to_datum_exp_dir() (in module pyleoclim.utils.tsbase)
timeUnitsCheck() (in module pyleoclim.utils.lipdutils)
to_array() (pyleoclim.core.ensembleseries.EnsembleSeries method)
to_csv() (pyleoclim.core.multipleseries.MultipleSeries method)
(pyleoclim.core.series.Series method)
to_dataframe() (pyleoclim.core.ensembleseries.EnsembleSeries method)
to_json() (pyleoclim.core.multipleseries.MultipleSeries method)
(pyleoclim.core.series.Series method)
to_pandas() (pyleoclim.core.multipleseries.MultipleSeries method)
(pyleoclim.core.series.Series method)
ts2segments() (in module pyleoclim.utils.tsutils)
ts_pad() (in module pyleoclim.utils.filter)
U
uar1_fit() (in module pyleoclim.utils.tsmodel)
uar1_sim() (in module pyleoclim.utils.tsmodel)
V
view() (pyleoclim.core.multipleseries.MultipleSeries method)
(pyleoclim.core.series.Series method)
W
wavelet() (pyleoclim.core.multipleseries.MultipleSeries method)
(pyleoclim.core.series.Series method)
wavelet_coherence() (pyleoclim.core.series.Series method)
welch() (in module pyleoclim.utils.spectral)
whatArchives() (in module pyleoclim.utils.lipdutils)
whatInferredVariables() (in module pyleoclim.utils.lipdutils)
whatInterpretations() (in module pyleoclim.utils.lipdutils)
whatProxyObservations() (in module pyleoclim.utils.lipdutils)
whatProxySensors() (in module pyleoclim.utils.lipdutils)
whichEnsemble() (in module pyleoclim.utils.lipdutils)
whichMeasurement() (in module pyleoclim.utils.lipdutils)
within_distance() (in module pyleoclim.utils.mapping)
wtc() (in module pyleoclim.utils.wavelet)
wwa2psd() (in module pyleoclim.utils.wavelet)
wwz() (in module pyleoclim.utils.wavelet)
wwz_basic() (in module pyleoclim.utils.wavelet)
wwz_coherence() (in module pyleoclim.utils.wavelet)
wwz_nproc() (in module pyleoclim.utils.wavelet)
wwz_psd() (in module pyleoclim.utils.spectral)
X
xAxisTs() (in module pyleoclim.utils.lipdutils)
xwt() (in module pyleoclim.utils.wavelet)